mmc.obsm_to_X()

mmochi.utils.obsm_to_X(adata, data_key=DATA_KEY)

Makes the .obsm[data_key] of an AnnData object into its .X, if multiple data_key values provided, will merge first found key.

Parameters:

• adata (AnnData) –

• data_key (str (default: DATA_KEY)) – key in the adata.obsm to convert to the .X of this new adata

Returns:

Object with .X of AnnData.obsm[data_key]

Return type:

adata_new